fred_calibrate_contacts

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Synopsis

usage: fred_calibrate_contacts -p model [ options ], where options include:
    -c condition: name of the condition to calibrate [INF]
    -h: print this help message.
    -m cores: run m simulations in parallel [4]
    -n runs: run n simulation to evalaute each parameter set [20]
    -p: initial main program file [main.fred]
    -t threshold: error threshold for accepting parameters [0.01]
    -A Attack_rate: target symptomatic attack rate [33]
    -H Htarget: target percent of infections in households [30]
    -N Ntarget: target percent of infections in neighborhoods [33]
    -S Starget: target percent of infections in schools [24.66]
    -W Wtarget: target percent of infections in workplaces [12.34]

Description

This will be replaced with a command description

Options

-h

Print the usage message for this command.

-a

Option description, these will be in the same order as the usage message

-b

Option description, ending in a period.

Returns

This will describe the typical output or return value of the item, where applicable.

Examples

This will provide one or more examples for the command.

# some code

Environment

This will describe any key environment variables or other environmental settings that impact this item. If none, this will be deleted.

Errors

This will list the errors that may occur with this item. An exhaustive list is not required.

Notes

Any other notes related to this item, or remove this section. This might include:

  • The release this item was introduced. Use sentence “This <type> was introduced in release X.X”

  • Implementation notes such as complexity or resource utilization (such as memory).

  • Other important information as appropriate.

See Also

To be replaced with appropriate references, use the ref directive, as in

:ref:`fred_compile`

This produces the link fred_job, or just prints the name if the reference does not exist.